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java.lang.Object sbc.orthoxml.Database
public class Database
The Database class represent the source database for genes, proteins or transcripts.
Constructor Summary | |
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Database(java.lang.String name,
java.lang.String version)
Creates a database object. |
Method Summary | |
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boolean |
equals(java.lang.Object obj)
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java.lang.String |
getGeneLink()
Returns the link to the gene in the database how this link is create is source specific. |
java.lang.String |
getName()
The name of the database |
java.lang.String |
getProtLink()
Returns the link to the protein in the database how this link is create is source specific. |
java.lang.String |
getTranscriptLink()
Returns the link to the transcript in the database how this link is create is source specific. |
java.lang.String |
getVersion()
Returns the version the database; |
int |
hashCode()
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void |
setGeneLink(java.lang.String geneLink)
Allows to link to the gene in the database how this link is create is source specific. |
void |
setProtLink(java.lang.String protLink)
Allows to link to the protein in the database how this link is create is source specific. |
void |
setTranscriptLink(java.lang.String transcriptLink)
Allows to link to the transcript in the database how this link is create is source specific. |
Methods inherited from class java.lang.Object |
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getClass, notify, notifyAll, toString, wait, wait, wait |
Constructor Detail |
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public Database(java.lang.String name, java.lang.String version)
name
- The database name i.e. Ensemblversion
- The database version i.e. '53' or 'March 2011'Method Detail |
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public java.lang.String getName()
public java.lang.String getProtLink()
public void setProtLink(java.lang.String protLink)
protLink
- the protein link to setpublic java.lang.String getGeneLink()
public void setGeneLink(java.lang.String geneLink)
geneLink
- the gene link to setpublic java.lang.String getTranscriptLink()
public void setTranscriptLink(java.lang.String transcriptLink)
transcriptLink
- the transcriptLink to setpublic java.lang.String getVersion()
public int hashCode()
hashCode
in class java.lang.Object
public boolean equals(java.lang.Object obj)
equals
in class java.lang.Object
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